Rezultate și publicații

  • Publicații

    Articole publicate

    Title: Analysis of metagenomic data

    Journal: Nature Reviews Methods Primers

    Journal info: IF=50, Top 25% quartile Q1: Yes 

    Authors: Liu S, Rodriguez JS, Munteanu V, Ronkowski C, Sharma NK, Alser M, Andreace F, Blekhman R, Blaszczyk D, Chikhi R, Crandall KA, Della Libera K, Francis D, Frolova A, Gancz AS, Huntley NE, Jaiswal P, Kosciolek T, Labaj PP, Labaj W, Luan T, Mason C, Moustafa AM, Muralidharan HS, Mutlu O, Mansouri Ghiasi N, Rahnavard A, Sun F, Tian S, Tierney BT, Van Syoc E, Vicedomini R, Zackular JP, Zelikovsky A, Zieli´nska K, Ganda E, Davenport ER, Pop M, Koslicki D, Mangul S

    Authors with affiliation of University of Suceava: Viorel Munteanu, Alex Zelikovsky

    Status: published on January 23

    WW grant acknowledged in the Funding section: VM and AZ are supported in part by the grant of the Ministry of Research, Innovation and Digitization, under the Romania’s National Recovery and Resilience Plan – Funded by EU – NextGenerationEU” program no. 760286/27.03.2024, code 167/31.07.2023, within Pillar III, Component C9, Investment 8.

    doi.org/10.1038/s43586-024-00376-6

    Titlul: Leveraging Wastewater Sequencing to Strengthen Global Public Health Surveillance

    Revista BMC Global and Public Health  

    Informație despre revistă: nu are impact factor deocamdată (revistă proaspăt apărută)

    Autori: Victor Gordeev, Martin Hölzer, Daniel Desirò, Iryna V. Goraichuk, Sergey Knyazev, Helena Solo-Gabriele, Pavel Skums, Smruthi Karthikeyan, Alexandria Evans, Shelesh Agrawal, Alexander G Lucaci, Christopher E Mason, Justin Maine Su, Cynthia Gibas, Niranjan Nagarajan, Rafael Peres da Silva, Nicolae Drabcinski, Viorel Munteanu, Lingyu Zhan, Julia Rubin, Nicholas C. Wu, Andrew Trister, Dumitru Ciorba, Viorel Bostan, Andrei Lobiuc, Mihai Covasa, Roel A. Ophoff, Alex Zelikovsky, Mihai Dimian, Serghei Mangul

    Statut: Publicat pe 21 martie, 2025

    Mențiunea grantului MetBio în secțiunea Finanțare: VG, VM, MC, AL, MD, AZ and SM were supported by a grant of the Ministry of Research, Innovation and Digitization, under the Romania’s National Recovery and Resilience Plan – Funded by EU – NextGenerationEU program, project ”Metagenomics and Bioinformatics tools for Wastewater-based Genomic Surveillance of viral Pathogens for early prediction of public health risks – (MetBio-WGSP)” number 760286/27.03.2024, code 167/31.07.2023, within Pillar III, Component C9, Investment 8

    https://doi.org/10.1038/s43586-024-00376-6

    Participări conferințe

    Conference: Modern Benchmarking Ascona, 

    Date 23-27 March 2025

    Title: “Benchmarking of software tools for wastewater genomic surveillance”

    Presenter: Alex Zelikovsky

    Conferința: ICCABS 2025

    Autori: Grigore Boldirev, Nitesh Kumar Sharma, Chimaoge Peace Aguma, Viorel Munteanu, Serghei Mangul, Mohammed Alser and Alex Zelikovsky

    Grigore Boldirev, Nitesh Kumar Sharma, Chimaoge Peace Aguma, Serghei Mangul, Mohammed Alser and Alex Zelikovsky

    Titlu: Assessing Microbial Genome Representation Across Various Reference Databases: A Comprehensive Evaluation

    Prezentator: Chimaoge Peace Aguma

    Conferința: ICCABS 2025

    Autori: Victor Gordeev, Viorel Munteanu, Martin Hölzer, Shelesh Agrawal, Nicolae Drabcinski, Dumitru Ciorba, Mihai Covasa, Andrei Lobiuc, Viorel Bostan, Mihai Dimian, Alex Zelikovsky and Serghei Mangul

    Titlu: A rigorous benchmarking of methods for SARS-CoV-2 lineage abundance estimation in wastewater

    Prezentator: Victor Gordeev